Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015914133.1_cds_XP_016464159.1_57220
CDS Infomation

[gene=LOC107787148] [db_xref=GeneID:107787148] [protein=transcription factor GTE10-like isoform X3] [protein_id=XP_016464159.1] [location=join(35150..36496,36596..36644,36784..36912,40151..40218,41395..41458,41588..41656,41740..41855,41961..42027,42111..42241,42318..42590)] [gbkey=CDS]
Sequence

ATGGCACCTACTGTTCCAATAGATTACGTTGGGCAGAGAGAATCCAAGAAGTTGTTTAAA
AAGGATTCAGGTGATATGATGGGAAAATCTCGCAAGGTTTTTAAAGGTTACGCGTCTGGG
ATTGTGCCAGATTTTTGCAATGCTGTTGAGACAATGGCAGAATCAGAGGGTTTTGGGAGC
TCAGGACGGGTTGATACTGAAAGGACTGCTTCGGAAGACTCTTGTGCACCTAAAAGGAAA
TCCTTTTGTTTGAATGCTGATGGTTATGATCGATTTGGTGTACCTATTCAAGTAATGTCG
TTGTCCAAGATGTCACGTTCTGAGAGAAGAGGTTTGGGAATTAGGTTGAGGAATGAACTT
GAACAAATCAGGGCACTGCAGAAGAAAATTACTTCTGTCGACTCTAATATTTCGGTTCAT
TCACCTGCTAGCAATATTCATAATTGCACCGATGGGCAGAGGAGGTCAGGATCAGAGATA
TCTCAGAGGTGTCTGACTGAAGCAGTGGTGCCTCCTGGGAAGAAAAAGGCTGTGCTGGGA
AGAAATGGACCTCTTACTAAAGGATCAGGAGCTAAGCGGCCTAAGCCAATGAAACAGGCC
GTCCCTTCAGATACCAGCACTGTCATGTTGATGAAACAATGTGAGACACTGCTAAACCGA
CTGATGTCACATCAGCATGGTTGGGTCTTTAATACTCCAGTTGATGTTGTAAAGTTAAAA
ATCCCCGACTATTTCACTGTTATTAAGCAACCAATGGACCTAGGGACAGTCAAATCAAAG
TTACATTCCGGAGAATATTTGAGCCCTTTGCAGTTTGCTGCAGATGTGAGGCTCACTTTT
AGAAATGCAATGACATATAATCCGCCAGGAAATGATGTTCATTTCATGGCTCAAACACTT
AGTAAATTTTTCGAGGTTAGATGGAAGCCCTTAGAAAAGAAGATTCCTATAATAGAAGAG
GAACCTTTACCTTCTAAATCGAGTGTTATCTTAGAAACTGAAACTGATACTCCTCTAGCA
ATGCCGCCTTCAAAGAAGAAGAAAGTTGCTCCGCTGGAGAGCAAGGTTAAACCAGAGCCC
GTAAAGCGAGTCATGAGTGATGCCGACAAGCATAAACTCACTGCGGAGATTGAAGCTTTA
CTGGCTGAATTACCTGAAAATATAATTGATTTCTTGAGAGAAAAAAGCTTCAATGGAAGT
CAAGTTAGTGAAGACGAGATCGAGATTGATCTCGATGCTCTTAATGATGATATCTTGTAC
GAACTACGGAAGCTTTTGGATGAGTATCTGCTGGAAAAACAGAAAAAGCAGGCAAAAGGT
GAACCCTGTGAGATGGAGGTAAATACACTTCACGATGAGTCTGGATTCAGCAATTCATCC
ATGCAACCATGCAAAGGAAATGATCCGGCAGATGAGGAAGTGGATATTGGTGGGAATGAT
CCACCTGCTTCAAGCTTCCCGCCTGTGGAGATTGAGAAGGATAGAGCTCGCAGGAGCAAT
AAATGCAGTAGTTCAAGCAGTTCGAATTCCGGAAGCTCATCTGGTGATGAATCAGATGCT
GGTAAAGATTCAGTTCCTAAAACTGTTCAGAAGGCAACAGCGGCTTCAGGGGGGAGAACC
GAGCAGGAAGATGAGCTTGATCTTCCAGAGACTAAAGATTCCCTGGCTGACCTGCTGAAT
TCCGAGAAAAAGTCCATTTCTGCTGAGCCCGATGATCATCGAGAGGAGGAGAGTGCTGAA
CCTGAGAGGCAAGTCTCTCCTGAGAAGCTTTACCGCGCAGCTTTGTTAAGAGGTCGGTTT
GCGGATATCATACTAAAAGCTCAGGAGAAGAGCCTTGAAAAGGGTGAAGTGCGGGACCCT
GAAAGGCTAAAGCTCGAGAAAGAGGAGTTTGAAAGGCGAAGGCGAGAAGAGAAAGCTCGC
TTACAAGCGGAAGCTAAGGCTGCCGAAGAGGCTCGTAGGAGAGCCGATGCAGAAGCTGCT
GCAGAAGCCAAAAGGAAACGAGAACTTGAAAGAGAAGCTGCCCGTCAGGCACTCCAGAAG
ATGGAGAAGACTGTTGAAATCAATGAGAACAGTCGATTTTTGGAGGATCTGGAGTTGTTT
AAAGCTGCTCCAGATGAACAGTTAGAGAGCTTCATTGAGGAAACGAGTCCTGGTCATTCT
GAGAATGTTCTTGGCAGTTTCAAATTTAAGGCAAGTAGTAATCCGTTGGAGCAACTAGGG
TTATATATAAAGGATGACGAGGAGGAAGAAGAAACTGAACCACATAGCGTTCCTGCCGTA
TCGAATGATCCGGAGGAAGGAGAGATTGATTAA

Peptide Sequence

PEP ID

XP_016464159.1
PEP Infomation

PREDICTED: transcription factor GTE10-like isoform X3 [Nicotiana tabacum]
Sequence

MAPTVPIDYVGQRESKKLFKKDSGDMMGKSRKVFKGYASGIVPDFCNAVETMAESEGFGS
SGRVDTERTASEDSCAPKRKSFCLNADGYDRFGVPIQVMSLSKMSRSERRGLGIRLRNEL
EQIRALQKKITSVDSNISVHSPASNIHNCTDGQRRSGSEISQRCLTEAVVPPGKKKAVLG
RNGPLTKGSGAKRPKPMKQAVPSDTSTVMLMKQCETLLNRLMSHQHGWVFNTPVDVVKLK
IPDYFTVIKQPMDLGTVKSKLHSGEYLSPLQFAADVRLTFRNAMTYNPPGNDVHFMAQTL
SKFFEVRWKPLEKKIPIIEEEPLPSKSSVILETETDTPLAMPPSKKKKVAPLESKVKPEP
VKRVMSDADKHKLTAEIEALLAELPENIIDFLREKSFNGSQVSEDEIEIDLDALNDDILY
ELRKLLDEYLLEKQKKQAKGEPCEMEVNTLHDESGFSNSSMQPCKGNDPADEEVDIGGND
PPASSFPPVEIEKDRARRSNKCSSSSSSNSGSSSGDESDAGKDSVPKTVQKATAASGGRT
EQEDELDLPETKDSLADLLNSEKKSISAEPDDHREEESAEPERQVSPEKLYRAALLRGRF
ADIILKAQEKSLEKGEVRDPERLKLEKEEFERRRREEKARLQAEAKAAEEARRRADAEAA
AEAKRKRELEREAARQALQKMEKTVEINENSRFLEDLELFKAAPDEQLESFIEETSPGHS
ENVLGSFKFKASSNPLEQLGLYIKDDEEEEETEPHSVPAVSNDPEEGEID

Transcript Sequence

Gene sequence data has not been registered.